Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL20A1Q9P218 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL20A1Q9P218 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL20A1Q9P218 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.17■■□□□ 1.46
COL20A1Q9P218 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
COL20A1Q9P218 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL20A1Q9P218 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL20A1Q9P218 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL20A1Q9P218 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 SLC7A5P1-201ENST00000568957 537 ntBASIC24.16■■□□□ 1.46
COL20A1Q9P218 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL20A1Q9P218 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.16■■□□□ 1.46
COL20A1Q9P218 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
COL20A1Q9P218 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.15■■□□□ 1.46
COL20A1Q9P218 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL20A1Q9P218 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.14■■□□□ 1.46
COL20A1Q9P218 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.14■■□□□ 1.46
COL20A1Q9P218 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.14■■□□□ 1.46
COL20A1Q9P218 AC010542.4-201ENST00000563151 1910 ntBASIC24.14■■□□□ 1.46
COL20A1Q9P218 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL20A1Q9P218 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.14■■□□□ 1.45
COL20A1Q9P218 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.14■■□□□ 1.45
COL20A1Q9P218 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.14■■□□□ 1.45
COL20A1Q9P218 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.14■■□□□ 1.45
COL20A1Q9P218 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 GPX1P1-201ENST00000388829 606 ntBASIC24.13■■□□□ 1.45
COL20A1Q9P218 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 GUSBP6-202ENST00000438529 1198 ntBASIC24.13■■□□□ 1.45
COL20A1Q9P218 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
COL20A1Q9P218 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL20A1Q9P218 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL20A1Q9P218 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL20A1Q9P218 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL20A1Q9P218 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL20A1Q9P218 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 FAM99A-202ENST00000538190 1989 ntBASIC24.12■■□□□ 1.45
COL20A1Q9P218 AC061975.6-201ENST00000579045 1553 ntBASIC24.12■■□□□ 1.45
COL20A1Q9P218 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.12■■□□□ 1.45
COL20A1Q9P218 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL20A1Q9P218 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL20A1Q9P218 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL20A1Q9P218 AL355802.2-201ENST00000402069 882 ntBASIC24.11■■□□□ 1.45
COL20A1Q9P218 TERF1P5-201ENST00000477545 1207 ntBASIC24.11■■□□□ 1.45
COL20A1Q9P218 AC083906.2-201ENST00000511578 360 ntBASIC24.11■■□□□ 1.45
COL20A1Q9P218 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL20A1Q9P218 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL20A1Q9P218 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.11■■□□□ 1.45
COL20A1Q9P218 AC068473.5-201ENST00000616428 2072 ntBASIC24.11■■□□□ 1.45
COL20A1Q9P218 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.1■■□□□ 1.45
COL20A1Q9P218 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL20A1Q9P218 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.1■■□□□ 1.45
COL20A1Q9P218 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL20A1Q9P218 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.1■■□□□ 1.45
COL20A1Q9P218 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.1■■□□□ 1.45
COL20A1Q9P218 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL20A1Q9P218 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.1■■□□□ 1.45
COL20A1Q9P218 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL20A1Q9P218 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
COL20A1Q9P218 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.09■■□□□ 1.45
COL20A1Q9P218 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL20A1Q9P218 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL20A1Q9P218 AL121832.2-201ENST00000610979 668 ntBASIC24.09■■□□□ 1.45
COL20A1Q9P218 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 TSPY6P-201ENST00000448518 926 ntBASIC24.08■■□□□ 1.45
COL20A1Q9P218 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL20A1Q9P218 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 AC008175.2-201ENST00000612840 297 ntBASIC24.08■■□□□ 1.45
COL20A1Q9P218 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.08■■□□□ 1.45
COL20A1Q9P218 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms