Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 AC137761.2-201ENST00000561729 223 ntBASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 AC145350.3-201ENST00000569033 163 ntBASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPHK1Q9NYA1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 AP001160.3-201ENST00000601484 763 ntBASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 AC053503.5-201ENST00000601508 636 ntBASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
SPHK1Q9NYA1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 AC138907.5-202ENST00000569484 235 ntBASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPHK1Q9NYA1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.45■□□□□ 0.87
SPHK1Q9NYA1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 AC006015.1-201ENST00000429970 570 ntBASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 AL137784.2-201ENST00000607332 1000 ntBASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SPHK1Q9NYA1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 AC004911.1-201ENST00000416316 871 ntBASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 AC010141.2-201ENST00000452426 721 ntBASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPHK1Q9NYA1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 AC016769.1-201ENST00000409132 1010 ntBASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPHK1Q9NYA1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPHK1Q9NYA1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms