Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCX3AQ9NNX9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.77■□□□□ 0.75
VCX3AQ9NNX9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VCX3AQ9NNX9 AC090340.1-201ENST00000620778 4980 ntBASIC19.77■□□□□ 0.75
VCX3AQ9NNX9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.76■□□□□ 0.75
VCX3AQ9NNX9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 AC092296.2-201ENST00000589470 999 ntBASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCX3AQ9NNX9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 ECEL1P2-201ENST00000461596 1295 ntBASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VCX3AQ9NNX9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 LINC01960-201ENST00000563759 1884 ntBASIC19.73■□□□□ 0.75
VCX3AQ9NNX9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 AC098818.2-201ENST00000564925 2320 ntBASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 AC026202.3-201ENST00000600805 1127 ntBASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3AQ9NNX9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms