Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ZFYVE28Q9HCC9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.48■■□□□ 1.51
ZFYVE28Q9HCC9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 LINC00526-201ENST00000581067 1875 ntBASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZFYVE28Q9HCC9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 AC243732.1-201ENST00000612648 864 ntBASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZFYVE28Q9HCC9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
ZFYVE28Q9HCC9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 FAM197Y4-202ENST00000622692 608 ntBASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 AC073912.3-201ENST00000624414 853 ntBASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.45■■□□□ 1.5
ZFYVE28Q9HCC9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 ECEL1P3-201ENST00000427961 737 ntBASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 MIR4497-201ENST00000583208 89 ntBASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ZFYVE28Q9HCC9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 AC008403.3-201ENST00000598924 454 ntBASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.43■■□□□ 1.5
ZFYVE28Q9HCC9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 MIR1224-201ENST00000408193 85 ntBASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.42■■□□□ 1.5
ZFYVE28Q9HCC9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 RPPH1-201ENST00000516869 333 ntBASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 AC060766.5-201ENST00000590539 871 ntBASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.41■■□□□ 1.5
ZFYVE28Q9HCC9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZFYVE28Q9HCC9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms