Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 MIR663A-201ENST00000385250 93 ntBASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 AL050303.2-201ENST00000619798 666 ntBASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MINDY3Q9H8M7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 CNN2P6-201ENST00000439038 900 ntBASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.23■■□□□ 1.31
MINDY3Q9H8M7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 AC242852.2-201ENST00000615738 1807 ntBASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 AC006970.2-201ENST00000450065 779 ntBASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 AC010536.3-201ENST00000620306 533 ntBASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
MINDY3Q9H8M7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
MINDY3Q9H8M7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 AC061975.6-201ENST00000579045 1553 ntBASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 NCF1B-203ENST00000435988 1254 ntBASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 SLC7A5P1-201ENST00000568957 537 ntBASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MINDY3Q9H8M7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 AC231657.2-201ENST00000624556 255 ntBASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MINDY3Q9H8M7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.18■■□□□ 1.3
MINDY3Q9H8M7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MINDY3Q9H8M7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.18■■□□□ 1.3
MINDY3Q9H8M7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
MINDY3Q9H8M7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms