Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 AC016769.1-201ENST00000409132 1010 ntBASIC18.79■□□□□ 0.6
USB1Q9BQ65 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USB1Q9BQ65 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.78■□□□□ 0.6
USB1Q9BQ65 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.78■□□□□ 0.6
USB1Q9BQ65 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.78■□□□□ 0.6
USB1Q9BQ65 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.78■□□□□ 0.6
USB1Q9BQ65 AP004607.7-201ENST00000527152 1677 ntBASIC18.78■□□□□ 0.6
USB1Q9BQ65 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USB1Q9BQ65 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.77■□□□□ 0.6
USB1Q9BQ65 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.77■□□□□ 0.6
USB1Q9BQ65 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.77■□□□□ 0.6
USB1Q9BQ65 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 AC137761.2-201ENST00000561729 223 ntBASIC18.77■□□□□ 0.6
USB1Q9BQ65 AC145350.3-201ENST00000569033 163 ntBASIC18.77■□□□□ 0.6
USB1Q9BQ65 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 ESRRAP2-201ENST00000418437 1549 ntBASIC18.77■□□□□ 0.6
USB1Q9BQ65 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USB1Q9BQ65 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
USB1Q9BQ65 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USB1Q9BQ65 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
USB1Q9BQ65 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USB1Q9BQ65 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 AC006015.1-201ENST00000429970 570 ntBASIC18.76■□□□□ 0.59
USB1Q9BQ65 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USB1Q9BQ65 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USB1Q9BQ65 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 AC004854.2-201ENST00000608450 1441 ntBASIC18.75■□□□□ 0.59
USB1Q9BQ65 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USB1Q9BQ65 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.75■□□□□ 0.59
USB1Q9BQ65 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms