Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRGV9Q99603 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 LINC01521-201ENST00000504184 1943 ntBASIC16.51■□□□□ 0.23
TRGV9Q99603 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV9Q99603 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRGV9Q99603 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV9Q99603 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRGV9Q99603 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRGV9Q99603 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV9Q99603 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV9Q99603 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRGV9Q99603 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRGV9Q99603 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV9Q99603 SLC47A1P1-202ENST00000449666 945 ntBASIC16.5■□□□□ 0.23
TRGV9Q99603 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.5■□□□□ 0.23
TRGV9Q99603 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV9Q99603 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV9Q99603 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV9Q99603 AP006587.3-201ENST00000525742 1516 ntBASIC16.5■□□□□ 0.23
TRGV9Q99603 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV9Q99603 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV9Q99603 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV9Q99603 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV9Q99603 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRGV9Q99603 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV9Q99603 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRGV9Q99603 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV9Q99603 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRGV9Q99603 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.48■□□□□ 0.23
TRGV9Q99603 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV9Q99603 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TRGV9Q99603 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV9Q99603 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.48■□□□□ 0.23
TRGV9Q99603 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV9Q99603 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRGV9Q99603 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV9Q99603 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV9Q99603 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV9Q99603 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV9Q99603 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.47■□□□□ 0.23
TRGV9Q99603 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRGV9Q99603 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRGV9Q99603 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRGV9Q99603 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV9Q99603 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV9Q99603 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV9Q99603 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV9Q99603 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV9Q99603 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV9Q99603 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms