Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.72■■■□□ 2.51
SCAF11Q99590 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF11Q99590 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF11Q99590 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.71■■■□□ 2.51
SCAF11Q99590 AC053503.5-201ENST00000601508 636 ntBASIC30.71■■■□□ 2.51
SCAF11Q99590 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SCAF11Q99590 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.71■■■□□ 2.51
SCAF11Q99590 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
SCAF11Q99590 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCAF11Q99590 AC010980.2-201ENST00000587099 1412 ntBASIC30.7■■■□□ 2.51
SCAF11Q99590 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.7■■■□□ 2.51
SCAF11Q99590 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCAF11Q99590 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.7■■■□□ 2.51
SCAF11Q99590 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SCAF11Q99590 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCAF11Q99590 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCAF11Q99590 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.7■■■□□ 2.5
SCAF11Q99590 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SCAF11Q99590 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SCAF11Q99590 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
SCAF11Q99590 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.7■■■□□ 2.5
SCAF11Q99590 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
SCAF11Q99590 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAF11Q99590 AP004607.7-201ENST00000527152 1677 ntBASIC30.69■■■□□ 2.5
SCAF11Q99590 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.69■■■□□ 2.5
SCAF11Q99590 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF11Q99590 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF11Q99590 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF11Q99590 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
SCAF11Q99590 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.68■■■□□ 2.5
SCAF11Q99590 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF11Q99590 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF11Q99590 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.68■■■□□ 2.5
SCAF11Q99590 AL162412.1-201ENST00000567129 965 ntBASIC30.68■■■□□ 2.5
SCAF11Q99590 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF11Q99590 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.68■■■□□ 2.5
SCAF11Q99590 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF11Q99590 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF11Q99590 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF11Q99590 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF11Q99590 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF11Q99590 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF11Q99590 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SCAF11Q99590 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF11Q99590 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF11Q99590 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAF11Q99590 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SCAF11Q99590 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.66■■■□□ 2.5
SCAF11Q99590 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.66■■■□□ 2.5
SCAF11Q99590 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF11Q99590 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF11Q99590 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF11Q99590 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.65■■■□□ 2.5
SCAF11Q99590 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SCAF11Q99590 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF11Q99590 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAF11Q99590 AC079089.2-201ENST00000531211 1277 ntBASIC30.65■■■□□ 2.5
SCAF11Q99590 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAF11Q99590 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF11Q99590 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.65■■■□□ 2.5
SCAF11Q99590 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAF11Q99590 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF11Q99590 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF11Q99590 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.64■■■□□ 2.5
SCAF11Q99590 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.64■■■□□ 2.5
SCAF11Q99590 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.64■■■□□ 2.5
SCAF11Q99590 AL359736.2-201ENST00000621992 437 ntBASIC30.64■■■□□ 2.5
SCAF11Q99590 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.64■■■□□ 2.5
SCAF11Q99590 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC30.64■■■□□ 2.5
SCAF11Q99590 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF11Q99590 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF11Q99590 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.49
SCAF11Q99590 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.64■■■□□ 2.49
SCAF11Q99590 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.63■■■□□ 2.49
SCAF11Q99590 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
SCAF11Q99590 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.63■■■□□ 2.49
SCAF11Q99590 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF11Q99590 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.63■■■□□ 2.49
SCAF11Q99590 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.62■■■□□ 2.49
SCAF11Q99590 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF11Q99590 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF11Q99590 AP006587.3-201ENST00000525742 1516 ntBASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms