Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.53■■□□□ 1.04
HHIPQ96QV1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.53■■□□□ 1.04
HHIPQ96QV1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.53■■□□□ 1.04
HHIPQ96QV1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HHIPQ96QV1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HHIPQ96QV1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HHIPQ96QV1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HHIPQ96QV1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HHIPQ96QV1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HHIPQ96QV1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.52■■□□□ 1.04
HHIPQ96QV1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HHIPQ96QV1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 KRT18P29-201ENST00000397031 1267 ntBASIC21.52■■□□□ 1.04
HHIPQ96QV1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.52■■□□□ 1.04
HHIPQ96QV1 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.52■■□□□ 1.04
HHIPQ96QV1 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.52■■□□□ 1.04
HHIPQ96QV1 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.52■■□□□ 1.04
HHIPQ96QV1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HHIPQ96QV1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HHIPQ96QV1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
HHIPQ96QV1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 AC093787.1-201ENST00000450396 207 ntBASIC21.51■■□□□ 1.03
HHIPQ96QV1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 EEF1DP3-203ENST00000566025 782 ntBASIC21.51■■□□□ 1.03
HHIPQ96QV1 AC016405.3-201ENST00000607710 860 ntBASIC21.51■■□□□ 1.03
HHIPQ96QV1 ITM2C-210ENST00000620962 501 ntBASIC21.51■■□□□ 1.03
HHIPQ96QV1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HHIPQ96QV1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HHIPQ96QV1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HHIPQ96QV1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HHIPQ96QV1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HHIPQ96QV1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HHIPQ96QV1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.5■■□□□ 1.03
HHIPQ96QV1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HHIPQ96QV1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.5■■□□□ 1.03
HHIPQ96QV1 LINC00526-201ENST00000581067 1875 ntBASIC21.49■■□□□ 1.03
HHIPQ96QV1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HHIPQ96QV1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HHIPQ96QV1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HHIPQ96QV1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HHIPQ96QV1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HHIPQ96QV1 AL034346.1-201ENST00000568244 1277 ntBASIC21.49■■□□□ 1.03
HHIPQ96QV1 AC008694.1-202ENST00000636953 945 ntBASIC21.49■■□□□ 1.03
HHIPQ96QV1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
HHIPQ96QV1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.48■■□□□ 1.03
HHIPQ96QV1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HHIPQ96QV1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HHIPQ96QV1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HHIPQ96QV1 AC007322.4-201ENST00000509611 723 ntBASIC21.48■■□□□ 1.03
HHIPQ96QV1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.48■■□□□ 1.03
HHIPQ96QV1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.48■■□□□ 1.03
HHIPQ96QV1 AC053503.5-201ENST00000601508 636 ntBASIC21.48■■□□□ 1.03
HHIPQ96QV1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.48■■□□□ 1.03
HHIPQ96QV1 AP006587.3-201ENST00000525742 1516 ntBASIC21.48■■□□□ 1.03
HHIPQ96QV1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HHIPQ96QV1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.48■■□□□ 1.03
HHIPQ96QV1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HHIPQ96QV1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
HHIPQ96QV1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HHIPQ96QV1 AL117328.2-201ENST00000624617 1940 ntBASIC21.47■■□□□ 1.03
HHIPQ96QV1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HHIPQ96QV1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HHIPQ96QV1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HHIPQ96QV1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
HHIPQ96QV1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HHIPQ96QV1 PRORSD1P-201ENST00000295112 541 ntBASIC21.47■■□□□ 1.03
HHIPQ96QV1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.47■■□□□ 1.03
HHIPQ96QV1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.47■■□□□ 1.03
HHIPQ96QV1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms