Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NEK1Q96PY6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.13■■□□□ 1.61
NEK1Q96PY6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NEK1Q96PY6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.13■■□□□ 1.61
NEK1Q96PY6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NEK1Q96PY6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.11■■□□□ 1.61
NEK1Q96PY6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.11■■□□□ 1.61
NEK1Q96PY6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NEK1Q96PY6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NEK1Q96PY6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.11■■□□□ 1.61
NEK1Q96PY6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 ZNRF2P3-201ENST00000424200 374 ntBASIC25.1■■□□□ 1.61
NEK1Q96PY6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.1■■□□□ 1.61
NEK1Q96PY6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NEK1Q96PY6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK1Q96PY6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NEK1Q96PY6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK1Q96PY6 AC027612.3-201ENST00000413684 1047 ntBASIC25.09■■□□□ 1.61
NEK1Q96PY6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK1Q96PY6 FEM1AP4-201ENST00000443167 1987 ntBASIC25.09■■□□□ 1.61
NEK1Q96PY6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NEK1Q96PY6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NEK1Q96PY6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.08■■□□□ 1.61
NEK1Q96PY6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
NEK1Q96PY6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK1Q96PY6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NEK1Q96PY6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.08■■□□□ 1.61
NEK1Q96PY6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.08■■□□□ 1.61
NEK1Q96PY6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.08■■□□□ 1.6
NEK1Q96PY6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
NEK1Q96PY6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.08■■□□□ 1.6
NEK1Q96PY6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
NEK1Q96PY6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
NEK1Q96PY6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NEK1Q96PY6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NEK1Q96PY6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
NEK1Q96PY6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.07■■□□□ 1.6
NEK1Q96PY6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NEK1Q96PY6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.07■■□□□ 1.6
NEK1Q96PY6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK1Q96PY6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.06■■□□□ 1.6
NEK1Q96PY6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 AC005229.4-201ENST00000610085 2198 ntBASIC25.06■■□□□ 1.6
NEK1Q96PY6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.06■■□□□ 1.6
NEK1Q96PY6 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.06■■□□□ 1.6
NEK1Q96PY6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
NEK1Q96PY6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.06■■□□□ 1.6
NEK1Q96PY6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK1Q96PY6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NEK1Q96PY6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
NEK1Q96PY6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms