Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.67■□□□□ 0.42
GAFA1Q96PS6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 AC244015.2-201ENST00000616358 1861 ntBASIC17.67■□□□□ 0.42
GAFA1Q96PS6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 MIR935-201ENST00000401179 91 ntBASIC17.67■□□□□ 0.42
GAFA1Q96PS6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 EEF1DP3-203ENST00000566025 782 ntBASIC17.67■□□□□ 0.42
GAFA1Q96PS6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GAFA1Q96PS6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.66■□□□□ 0.42
GAFA1Q96PS6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.65■□□□□ 0.42
GAFA1Q96PS6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GAFA1Q96PS6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 AC053503.5-201ENST00000601508 636 ntBASIC17.64■□□□□ 0.41
GAFA1Q96PS6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GAFA1Q96PS6 AC004854.2-201ENST00000608450 1441 ntBASIC17.64■□□□□ 0.41
GAFA1Q96PS6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GAFA1Q96PS6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms