Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.88■■□□□ 1.41
CDHR1Q96JP9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CDHR1Q96JP9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 AC242852.2-201ENST00000615738 1807 ntBASIC23.87■■□□□ 1.41
CDHR1Q96JP9 KRT16P2-201ENST00000414673 1423 ntBASIC23.87■■□□□ 1.41
CDHR1Q96JP9 MIR663A-201ENST00000385250 93 ntBASIC23.87■■□□□ 1.41
CDHR1Q96JP9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDHR1Q96JP9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 HLA-L-209ENST00000420110 1011 ntBASIC23.86■■□□□ 1.41
CDHR1Q96JP9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 AC013268.1-206ENST00000638368 961 ntBASIC23.86■■□□□ 1.41
CDHR1Q96JP9 AC112229.1-201ENST00000639295 961 ntBASIC23.86■■□□□ 1.41
CDHR1Q96JP9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
CDHR1Q96JP9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 NCF1B-203ENST00000435988 1254 ntBASIC23.85■■□□□ 1.41
CDHR1Q96JP9 TERF1P5-201ENST00000477545 1207 ntBASIC23.85■■□□□ 1.41
CDHR1Q96JP9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDHR1Q96JP9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.84■■□□□ 1.41
CDHR1Q96JP9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 AC005181.1-201ENST00000604782 1256 ntBASIC23.84■■□□□ 1.41
CDHR1Q96JP9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
CDHR1Q96JP9 FAM99A-202ENST00000538190 1989 ntBASIC23.83■■□□□ 1.41
CDHR1Q96JP9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 CNN2P6-201ENST00000439038 900 ntBASIC23.83■■□□□ 1.41
CDHR1Q96JP9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDHR1Q96JP9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDHR1Q96JP9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDHR1Q96JP9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CDHR1Q96JP9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDHR1Q96JP9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 GPX1P1-201ENST00000388829 606 ntBASIC23.81■■□□□ 1.4
CDHR1Q96JP9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 AC007322.4-201ENST00000509611 723 ntBASIC23.81■■□□□ 1.4
CDHR1Q96JP9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDHR1Q96JP9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms