Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE2Q96FN4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.33■□□□□ 0.53
CPNE2Q96FN4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 AP005435.1-201ENST00000529293 1178 ntBASIC18.33■□□□□ 0.52
CPNE2Q96FN4 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 AC011298.3-201ENST00000615796 283 ntBASIC18.33■□□□□ 0.52
CPNE2Q96FN4 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE2Q96FN4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 AL512631.2-201ENST00000604634 923 ntBASIC18.32■□□□□ 0.52
CPNE2Q96FN4 AC136469.2-201ENST00000623944 1028 ntBASIC18.32■□□□□ 0.52
CPNE2Q96FN4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE2Q96FN4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 AC092667.1-201ENST00000434301 2586 ntBASIC18.31■□□□□ 0.52
CPNE2Q96FN4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE2Q96FN4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.3■□□□□ 0.52
CPNE2Q96FN4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE2Q96FN4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE2Q96FN4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms