Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF31Q96EP0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF31Q96EP0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF31Q96EP0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF31Q96EP0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RNF31Q96EP0 OR7E47P-201ENST00000546390 1422 ntBASIC20.4■□□□□ 0.86
RNF31Q96EP0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF31Q96EP0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF31Q96EP0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF31Q96EP0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RNF31Q96EP0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF31Q96EP0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF31Q96EP0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF31Q96EP0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF31Q96EP0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.39■□□□□ 0.86
RNF31Q96EP0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF31Q96EP0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
RNF31Q96EP0 AC009237.3-201ENST00000393279 1427 ntBASIC20.39■□□□□ 0.85
RNF31Q96EP0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF31Q96EP0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF31Q96EP0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF31Q96EP0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF31Q96EP0 AC087742.1-201ENST00000575880 1738 ntBASIC20.39■□□□□ 0.85
RNF31Q96EP0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 AC055733.4-201ENST00000638462 1354 ntBASIC20.38■□□□□ 0.85
RNF31Q96EP0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 AP001160.3-201ENST00000601484 763 ntBASIC20.38■□□□□ 0.85
RNF31Q96EP0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 AL109923.1-201ENST00000618799 583 ntBASIC20.38■□□□□ 0.85
RNF31Q96EP0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF31Q96EP0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF31Q96EP0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.37■□□□□ 0.85
RNF31Q96EP0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF31Q96EP0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF31Q96EP0 AL050303.2-201ENST00000619798 666 ntBASIC20.37■□□□□ 0.85
RNF31Q96EP0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
RNF31Q96EP0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF31Q96EP0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF31Q96EP0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF31Q96EP0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF31Q96EP0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF31Q96EP0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF31Q96EP0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF31Q96EP0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF31Q96EP0 C1orf229-201ENST00000623686 2258 ntBASIC20.36■□□□□ 0.85
RNF31Q96EP0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF31Q96EP0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 AC137767.1-201ENST00000602918 1920 ntBASIC20.35■□□□□ 0.85
RNF31Q96EP0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF31Q96EP0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF31Q96EP0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF31Q96EP0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms