Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 AC142381.4-202ENST00000563973 229 ntBASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 AC010980.2-201ENST00000587099 1412 ntBASIC19.16■□□□□ 0.66
SNRNP40Q96DI7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 AC128676.1-201ENST00000454392 318 ntBASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 AL591742.1-201ENST00000604433 565 ntBASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP40Q96DI7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNRNP40Q96DI7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 AL162412.1-201ENST00000567129 965 ntBASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SNRNP40Q96DI7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP40Q96DI7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 RBM17P2-201ENST00000616397 1405 ntBASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 RPS2P4-201ENST00000476944 856 ntBASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.12■□□□□ 0.65
SNRNP40Q96DI7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 AL596275.1-201ENST00000423464 877 ntBASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms