Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCAMP4Q969E2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 AC137761.2-201ENST00000561729 223 ntBASIC21.11■□□□□ 0.97
SCAMP4Q969E2 AC145350.3-201ENST00000569033 163 ntBASIC21.11■□□□□ 0.97
SCAMP4Q969E2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SCAMP4Q969E2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 AP001160.3-201ENST00000601484 763 ntBASIC21.1■□□□□ 0.97
SCAMP4Q969E2 AC053503.5-201ENST00000601508 636 ntBASIC21.1■□□□□ 0.97
SCAMP4Q969E2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
SCAMP4Q969E2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCAMP4Q969E2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 AC138907.5-202ENST00000569484 235 ntBASIC21.08■□□□□ 0.97
SCAMP4Q969E2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.08■□□□□ 0.97
SCAMP4Q969E2 AL137784.2-201ENST00000607332 1000 ntBASIC21.08■□□□□ 0.97
SCAMP4Q969E2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.08■□□□□ 0.96
SCAMP4Q969E2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SCAMP4Q969E2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCAMP4Q969E2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 AC016769.1-201ENST00000409132 1010 ntBASIC21.07■□□□□ 0.96
SCAMP4Q969E2 AC004911.1-201ENST00000416316 871 ntBASIC21.07■□□□□ 0.96
SCAMP4Q969E2 AC006015.1-201ENST00000429970 570 ntBASIC21.07■□□□□ 0.96
SCAMP4Q969E2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCAMP4Q969E2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 AC010141.2-201ENST00000452426 721 ntBASIC21.06■□□□□ 0.96
SCAMP4Q969E2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SCAMP4Q969E2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.05■□□□□ 0.96
SCAMP4Q969E2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms