Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SMARCC1Q92922 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.39■■□□□ 1.97
SMARCC1Q92922 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SMARCC1Q92922 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCC1Q92922 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.38■■□□□ 1.97
SMARCC1Q92922 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.38■■□□□ 1.97
SMARCC1Q92922 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.38■■□□□ 1.97
SMARCC1Q92922 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCC1Q92922 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.37■■□□□ 1.97
SMARCC1Q92922 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.37■■□□□ 1.97
SMARCC1Q92922 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC1Q92922 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC1Q92922 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.36■■□□□ 1.97
SMARCC1Q92922 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC1Q92922 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC1Q92922 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.36■■□□□ 1.97
SMARCC1Q92922 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.36■■□□□ 1.97
SMARCC1Q92922 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.36■■□□□ 1.97
SMARCC1Q92922 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC1Q92922 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC1Q92922 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC1Q92922 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC1Q92922 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC1Q92922 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC1Q92922 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.35■■□□□ 1.97
SMARCC1Q92922 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC1Q92922 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC1Q92922 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.34■■□□□ 1.97
SMARCC1Q92922 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC1Q92922 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.34■■□□□ 1.97
SMARCC1Q92922 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.34■■□□□ 1.97
SMARCC1Q92922 AP003097.1-201ENST00000530657 1135 ntBASIC27.34■■□□□ 1.97
SMARCC1Q92922 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
SMARCC1Q92922 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC1Q92922 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC1Q92922 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC1Q92922 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.33■■□□□ 1.97
SMARCC1Q92922 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.33■■□□□ 1.97
SMARCC1Q92922 AC073648.6-201ENST00000641589 218 ntBASIC27.33■■□□□ 1.97
SMARCC1Q92922 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
SMARCC1Q92922 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.33■■□□□ 1.97
SMARCC1Q92922 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC1Q92922 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.33■■□□□ 1.97
SMARCC1Q92922 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SMARCC1Q92922 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC1Q92922 LSM12P1-201ENST00000411836 588 ntBASIC27.32■■□□□ 1.96
SMARCC1Q92922 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.32■■□□□ 1.96
SMARCC1Q92922 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.32■■□□□ 1.96
SMARCC1Q92922 UNC93B4-201ENST00000505679 747 ntBASIC27.32■■□□□ 1.96
SMARCC1Q92922 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.32■■□□□ 1.96
SMARCC1Q92922 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.32■■□□□ 1.96
SMARCC1Q92922 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.32■■□□□ 1.96
SMARCC1Q92922 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC1Q92922 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC1Q92922 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.31■■□□□ 1.96
SMARCC1Q92922 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.31■■□□□ 1.96
SMARCC1Q92922 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC1Q92922 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
SMARCC1Q92922 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.31■■□□□ 1.96
SMARCC1Q92922 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC1Q92922 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC1Q92922 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.3■■□□□ 1.96
SMARCC1Q92922 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC1Q92922 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.29■■□□□ 1.96
SMARCC1Q92922 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC1Q92922 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms