Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TTC9Q92623 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
TTC9Q92623 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.18■□□□□ 0.82
TTC9Q92623 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC9Q92623 RNA5SP413-201ENST00000516373 109 ntBASIC20.18■□□□□ 0.82
TTC9Q92623 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC9Q92623 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.18■□□□□ 0.82
TTC9Q92623 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC9Q92623 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TTC9Q92623 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 C1orf229-201ENST00000623686 2258 ntBASIC20.18■□□□□ 0.82
TTC9Q92623 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9Q92623 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9Q92623 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9Q92623 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9Q92623 AC098590.1-201ENST00000468126 897 ntBASIC20.17■□□□□ 0.82
TTC9Q92623 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC9Q92623 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC9Q92623 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.17■□□□□ 0.82
TTC9Q92623 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC9Q92623 AP006294.2-201ENST00000641667 209 ntBASIC20.17■□□□□ 0.82
TTC9Q92623 MYCNOS-205ENST00000641950 531 ntBASIC20.17■□□□□ 0.82
TTC9Q92623 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TTC9Q92623 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9Q92623 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.16■□□□□ 0.82
TTC9Q92623 CNN2P6-201ENST00000439038 900 ntBASIC20.16■□□□□ 0.82
TTC9Q92623 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC9Q92623 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TTC9Q92623 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC9Q92623 KRT87P-202ENST00000534226 1464 ntBASIC20.16■□□□□ 0.82
TTC9Q92623 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC9Q92623 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TTC9Q92623 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TTC9Q92623 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TTC9Q92623 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC9Q92623 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.15■□□□□ 0.82
TTC9Q92623 AC010141.3-201ENST00000456659 717 ntBASIC20.15■□□□□ 0.82
TTC9Q92623 MIR4758-201ENST00000577688 71 ntBASIC20.15■□□□□ 0.82
TTC9Q92623 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC9Q92623 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TTC9Q92623 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.15■□□□□ 0.82
TTC9Q92623 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9Q92623 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.14■□□□□ 0.82
TTC9Q92623 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TTC9Q92623 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9Q92623 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9Q92623 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.14■□□□□ 0.81
TTC9Q92623 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9Q92623 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9Q92623 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9Q92623 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.14■□□□□ 0.81
TTC9Q92623 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.14■□□□□ 0.81
TTC9Q92623 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.14■□□□□ 0.81
TTC9Q92623 LINC00565-201ENST00000562710 2331 ntBASIC20.14■□□□□ 0.81
TTC9Q92623 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC9Q92623 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC9Q92623 DUSP5P2-201ENST00000426873 1033 ntBASIC20.13■□□□□ 0.81
TTC9Q92623 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC9Q92623 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.13■□□□□ 0.81
TTC9Q92623 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.13■□□□□ 0.81
TTC9Q92623 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 SLC7A5P1-201ENST00000568957 537 ntBASIC20.13■□□□□ 0.81
TTC9Q92623 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TTC9Q92623 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9Q92623 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TTC9Q92623 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.13■□□□□ 0.81
TTC9Q92623 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9Q92623 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9Q92623 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TTC9Q92623 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9Q92623 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TTC9Q92623 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.12■□□□□ 0.81
TTC9Q92623 AL596275.1-201ENST00000423464 877 ntBASIC20.12■□□□□ 0.81
TTC9Q92623 GCSHP5-201ENST00000443090 522 ntBASIC20.12■□□□□ 0.81
TTC9Q92623 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TTC9Q92623 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.12■□□□□ 0.81
TTC9Q92623 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TTC9Q92623 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9Q92623 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.12■□□□□ 0.81
TTC9Q92623 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms