Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN4IP1Q8WWV3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 AC011298.3-201ENST00000615796 283 ntBASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RTN4IP1Q8WWV3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 AC136469.2-201ENST00000623944 1028 ntBASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RTN4IP1Q8WWV3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.77■□□□□ 0.43
RTN4IP1Q8WWV3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4IP1Q8WWV3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4IP1Q8WWV3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
RTN4IP1Q8WWV3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 OR2I1P-207ENST00000453522 948 ntBASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4IP1Q8WWV3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 UNC93B3-201ENST00000308076 687 ntBASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 AC104564.3-201ENST00000582367 638 ntBASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4IP1Q8WWV3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms