Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNRF4Q8WWF5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 UNC93B3-201ENST00000308076 687 ntBASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 AL034346.1-201ENST00000568244 1277 ntBASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 MIR4767-201ENST00000582827 78 ntBASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
ZNRF4Q8WWF5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 AC133561.4-201ENST00000566112 224 ntBASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 SMUG1P1-201ENST00000590640 811 ntBASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 AP006587.3-201ENST00000525742 1516 ntBASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNRF4Q8WWF5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 SLC25A24-204ENST00000569674 2357 ntBASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNRF4Q8WWF5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 AL049796.1-201ENST00000565336 1766 ntBASIC18.86■□□□□ 0.61
ZNRF4Q8WWF5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 BX842568.3-201ENST00000418104 571 ntBASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 AC024257.2-201ENST00000549699 147 ntBASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNRF4Q8WWF5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms