Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
APH1BQ8WW43 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1BQ8WW43 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.18■□□□□ 0.66
APH1BQ8WW43 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 PCDHAC2-203ENST00000615316 3011 ntBASIC19.18■□□□□ 0.66
APH1BQ8WW43 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1BQ8WW43 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
APH1BQ8WW43 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 KRT8P33-201ENST00000508125 1423 ntBASIC19.17■□□□□ 0.66
APH1BQ8WW43 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
APH1BQ8WW43 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.17■□□□□ 0.66
APH1BQ8WW43 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1BQ8WW43 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 AC003102.1-202ENST00000563394 1796 ntBASIC19.16■□□□□ 0.66
APH1BQ8WW43 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 AL451085.2-201ENST00000605085 799 ntBASIC19.16■□□□□ 0.66
APH1BQ8WW43 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
APH1BQ8WW43 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1BQ8WW43 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1BQ8WW43 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1BQ8WW43 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APH1BQ8WW43 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms