Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 AP004607.4-201ENST00000530158 1459 ntBASIC22.29■■□□□ 1.16
RNF139Q8WU17 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.29■■□□□ 1.16
RNF139Q8WU17 AC092666.2-201ENST00000613287 246 ntBASIC22.29■■□□□ 1.16
RNF139Q8WU17 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RNF139Q8WU17 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF139Q8WU17 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 FAM99A-202ENST00000538190 1989 ntBASIC22.29■■□□□ 1.16
RNF139Q8WU17 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF139Q8WU17 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF139Q8WU17 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 KRT19P1-201ENST00000405746 1186 ntBASIC22.27■■□□□ 1.16
RNF139Q8WU17 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
RNF139Q8WU17 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF139Q8WU17 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.27■■□□□ 1.15
RNF139Q8WU17 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RNF139Q8WU17 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 AC022517.1-201ENST00000592429 346 ntBASIC22.26■■□□□ 1.15
RNF139Q8WU17 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF139Q8WU17 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF139Q8WU17 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.25■■□□□ 1.15
RNF139Q8WU17 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF139Q8WU17 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF139Q8WU17 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RNF139Q8WU17 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF139Q8WU17 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF139Q8WU17 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
RNF139Q8WU17 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.24■■□□□ 1.15
RNF139Q8WU17 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF139Q8WU17 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
RNF139Q8WU17 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF139Q8WU17 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.23■■□□□ 1.15
RNF139Q8WU17 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF139Q8WU17 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF139Q8WU17 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF139Q8WU17 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF139Q8WU17 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF139Q8WU17 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
RNF139Q8WU17 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.23■■□□□ 1.15
RNF139Q8WU17 KRT18P61-201ENST00000585825 1298 ntBASIC22.23■■□□□ 1.15
RNF139Q8WU17 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms