Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.35■■□□□ 1.81
SSH3Q8TE77 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.35■■□□□ 1.81
SSH3Q8TE77 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.35■■□□□ 1.81
SSH3Q8TE77 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.35■■□□□ 1.81
SSH3Q8TE77 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 AC244015.2-201ENST00000616358 1861 ntBASIC26.34■■□□□ 1.81
SSH3Q8TE77 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 AC104187.1-201ENST00000607510 612 ntBASIC26.34■■□□□ 1.81
SSH3Q8TE77 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SSH3Q8TE77 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.34■■□□□ 1.81
SSH3Q8TE77 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.33■■□□□ 1.81
SSH3Q8TE77 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSH3Q8TE77 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.33■■□□□ 1.8
SSH3Q8TE77 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.33■■□□□ 1.8
SSH3Q8TE77 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SSH3Q8TE77 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SSH3Q8TE77 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.32■■□□□ 1.8
SSH3Q8TE77 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.32■■□□□ 1.8
SSH3Q8TE77 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.32■■□□□ 1.8
SSH3Q8TE77 AC138907.5-202ENST00000569484 235 ntBASIC26.32■■□□□ 1.8
SSH3Q8TE77 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSH3Q8TE77 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SSH3Q8TE77 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SSH3Q8TE77 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SSH3Q8TE77 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SSH3Q8TE77 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.3■■□□□ 1.8
SSH3Q8TE77 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSH3Q8TE77 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSH3Q8TE77 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSH3Q8TE77 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SSH3Q8TE77 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSH3Q8TE77 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
SSH3Q8TE77 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSH3Q8TE77 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
SSH3Q8TE77 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SSH3Q8TE77 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SSH3Q8TE77 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.28■■□□□ 1.8
SSH3Q8TE77 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SSH3Q8TE77 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms