Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.43■■□□□ 1.66
TRPM4Q8TD43 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 AC008403.3-201ENST00000598924 454 ntBASIC25.42■■□□□ 1.66
TRPM4Q8TD43 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM4Q8TD43 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 UBE2SP1-201ENST00000450587 669 ntBASIC25.41■■□□□ 1.66
TRPM4Q8TD43 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TRPM4Q8TD43 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM4Q8TD43 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.4■■□□□ 1.66
TRPM4Q8TD43 POU5F1P4-201ENST00000413175 1085 ntBASIC25.4■■□□□ 1.66
TRPM4Q8TD43 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.4■■□□□ 1.66
TRPM4Q8TD43 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.4■■□□□ 1.66
TRPM4Q8TD43 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM4Q8TD43 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRPM4Q8TD43 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.39■■□□□ 1.66
TRPM4Q8TD43 KRT17P1-201ENST00000399211 1546 ntBASIC25.39■■□□□ 1.66
TRPM4Q8TD43 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.39■■□□□ 1.66
TRPM4Q8TD43 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.39■■□□□ 1.66
TRPM4Q8TD43 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.39■■□□□ 1.66
TRPM4Q8TD43 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
TRPM4Q8TD43 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 LSM12P1-201ENST00000411836 588 ntBASIC25.38■■□□□ 1.65
TRPM4Q8TD43 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
TRPM4Q8TD43 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 AL355472.2-201ENST00000422958 438 ntBASIC25.37■■□□□ 1.65
TRPM4Q8TD43 ECEL1P3-201ENST00000427961 737 ntBASIC25.37■■□□□ 1.65
TRPM4Q8TD43 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 AC092068.2-201ENST00000590491 1708 ntBASIC25.37■■□□□ 1.65
TRPM4Q8TD43 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM4Q8TD43 KRT16P2-201ENST00000414673 1423 ntBASIC25.37■■□□□ 1.65
TRPM4Q8TD43 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 AC243732.1-201ENST00000612648 864 ntBASIC25.36■■□□□ 1.65
TRPM4Q8TD43 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRPM4Q8TD43 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRPM4Q8TD43 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms