Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLL1Q8TB92 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLL1Q8TB92 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLL1Q8TB92 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLL1Q8TB92 AC123595.1-201ENST00000440769 1046 ntBASIC20.83■□□□□ 0.93
HMGCLL1Q8TB92 TPRG1LP1-201ENST00000598702 760 ntBASIC20.83■□□□□ 0.93
HMGCLL1Q8TB92 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLL1Q8TB92 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HMGCLL1Q8TB92 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.83■□□□□ 0.92
HMGCLL1Q8TB92 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLL1Q8TB92 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLL1Q8TB92 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 AC009237.3-201ENST00000393279 1427 ntBASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 YBX1P1-201ENST00000445822 960 ntBASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 MIR6084-201ENST00000622012 110 ntBASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 FEM1AP4-201ENST00000443167 1987 ntBASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCLL1Q8TB92 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 AP004607.7-201ENST00000527152 1677 ntBASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLL1Q8TB92 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 AC026471.6-201ENST00000622954 1905 ntBASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLL1Q8TB92 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLL1Q8TB92 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGCLL1Q8TB92 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLL1Q8TB92 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLL1Q8TB92 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGCLL1Q8TB92 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCLL1Q8TB92 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms