Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 AC123595.1-201ENST00000440769 1046 ntBASIC21.7■■□□□ 1.06
PAF1Q8N7H5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 AC087623.3-201ENST00000607047 1098 ntBASIC21.7■■□□□ 1.06
PAF1Q8N7H5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 MIR6821-201ENST00000617625 74 ntBASIC21.7■■□□□ 1.06
PAF1Q8N7H5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 AC009237.3-201ENST00000393279 1427 ntBASIC21.7■■□□□ 1.06
PAF1Q8N7H5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PAF1Q8N7H5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
PAF1Q8N7H5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAF1Q8N7H5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 AC034268.1-201ENST00000441047 882 ntBASIC21.67■■□□□ 1.06
PAF1Q8N7H5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAF1Q8N7H5 AC242852.2-201ENST00000615738 1807 ntBASIC21.66■■□□□ 1.06
PAF1Q8N7H5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 AC026271.2-201ENST00000428091 497 ntBASIC21.66■■□□□ 1.06
PAF1Q8N7H5 KRT18P14-201ENST00000534205 1250 ntBASIC21.66■■□□□ 1.06
PAF1Q8N7H5 CCDC92B-201ENST00000575506 885 ntBASIC21.66■■□□□ 1.06
PAF1Q8N7H5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
PAF1Q8N7H5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PAF1Q8N7H5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.64■■□□□ 1.06
PAF1Q8N7H5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PAF1Q8N7H5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PAF1Q8N7H5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PAF1Q8N7H5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PAF1Q8N7H5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.64■■□□□ 1.05
PAF1Q8N7H5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PAF1Q8N7H5 AC005224.4-201ENST00000583262 1652 ntBASIC21.64■■□□□ 1.05
PAF1Q8N7H5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PAF1Q8N7H5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PAF1Q8N7H5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.64■■□□□ 1.05
PAF1Q8N7H5 AC079140.4-201ENST00000507448 529 ntBASIC21.64■■□□□ 1.05
PAF1Q8N7H5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms