Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
EFCAB3Q8N7B9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EFCAB3Q8N7B9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AC092667.1-201ENST00000434301 2586 ntBASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AC099791.1-201ENST00000416440 715 ntBASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AL137784.2-201ENST00000607332 1000 ntBASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 RARRES2P11-201ENST00000635158 484 ntBASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 AC244015.2-201ENST00000616358 1861 ntBASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EFCAB3Q8N7B9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFCAB3Q8N7B9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 LINC01960-201ENST00000563759 1884 ntBASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EFCAB3Q8N7B9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFCAB3Q8N7B9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 AC034268.1-201ENST00000441047 882 ntBASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFCAB3Q8N7B9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms