Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.2■■□□□ 1.78
SLX4Q8IY92 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.2■■□□□ 1.78
SLX4Q8IY92 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLX4Q8IY92 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.2■■□□□ 1.78
SLX4Q8IY92 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLX4Q8IY92 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLX4Q8IY92 AC008550.1-201ENST00000511500 884 ntBASIC26.19■■□□□ 1.78
SLX4Q8IY92 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLX4Q8IY92 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLX4Q8IY92 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLX4Q8IY92 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLX4Q8IY92 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.19■■□□□ 1.78
SLX4Q8IY92 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 AC120498.10-201ENST00000621827 505 ntBASIC26.18■■□□□ 1.78
SLX4Q8IY92 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 POU5F1P4-201ENST00000413175 1085 ntBASIC26.18■■□□□ 1.78
SLX4Q8IY92 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SLX4Q8IY92 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLX4Q8IY92 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.17■■□□□ 1.78
SLX4Q8IY92 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLX4Q8IY92 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLX4Q8IY92 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.17■■□□□ 1.78
SLX4Q8IY92 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.17■■□□□ 1.78
SLX4Q8IY92 AL359736.2-201ENST00000621992 437 ntBASIC26.17■■□□□ 1.78
SLX4Q8IY92 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.17■■□□□ 1.78
SLX4Q8IY92 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLX4Q8IY92 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLX4Q8IY92 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLX4Q8IY92 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLX4Q8IY92 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLX4Q8IY92 AL355472.2-201ENST00000422958 438 ntBASIC26.16■■□□□ 1.78
SLX4Q8IY92 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.16■■□□□ 1.78
SLX4Q8IY92 AL591742.1-201ENST00000604433 565 ntBASIC26.16■■□□□ 1.78
SLX4Q8IY92 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLX4Q8IY92 KRT17P1-201ENST00000399211 1546 ntBASIC26.16■■□□□ 1.78
SLX4Q8IY92 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SLX4Q8IY92 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLX4Q8IY92 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLX4Q8IY92 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 AC243732.1-201ENST00000612648 864 ntBASIC26.15■■□□□ 1.78
SLX4Q8IY92 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SLX4Q8IY92 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SLX4Q8IY92 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLX4Q8IY92 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.14■■□□□ 1.78
SLX4Q8IY92 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.14■■□□□ 1.78
SLX4Q8IY92 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SLX4Q8IY92 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SLX4Q8IY92 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLX4Q8IY92 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SLX4Q8IY92 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLX4Q8IY92 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLX4Q8IY92 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SLX4Q8IY92 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.14■■□□□ 1.77
SLX4Q8IY92 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.14■■□□□ 1.77
SLX4Q8IY92 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.13■■□□□ 1.77
SLX4Q8IY92 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.13■■□□□ 1.77
SLX4Q8IY92 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLX4Q8IY92 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLX4Q8IY92 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLX4Q8IY92 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLX4Q8IY92 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SLX4Q8IY92 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.12■■□□□ 1.77
SLX4Q8IY92 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLX4Q8IY92 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLX4Q8IY92 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SLX4Q8IY92 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLX4Q8IY92 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms