Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.35■■□□□ 1.81
SMC5Q8IY18 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC5Q8IY18 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC5Q8IY18 AC105233.4-201ENST00000642045 216 ntBASIC26.35■■□□□ 1.81
SMC5Q8IY18 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC5Q8IY18 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMC5Q8IY18 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.35■■□□□ 1.81
SMC5Q8IY18 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.34■■□□□ 1.81
SMC5Q8IY18 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.34■■□□□ 1.81
SMC5Q8IY18 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SMC5Q8IY18 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 MIR572-201ENST00000384983 95 ntBASIC26.34■■□□□ 1.81
SMC5Q8IY18 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC5Q8IY18 SUDS3P1-201ENST00000505831 966 ntBASIC26.34■■□□□ 1.81
SMC5Q8IY18 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.34■■□□□ 1.81
SMC5Q8IY18 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.34■■□□□ 1.81
SMC5Q8IY18 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMC5Q8IY18 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMC5Q8IY18 AL049796.1-201ENST00000565336 1766 ntBASIC26.33■■□□□ 1.81
SMC5Q8IY18 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMC5Q8IY18 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMC5Q8IY18 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SMC5Q8IY18 AC005224.4-201ENST00000583262 1652 ntBASIC26.33■■□□□ 1.81
SMC5Q8IY18 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.33■■□□□ 1.8
SMC5Q8IY18 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
SMC5Q8IY18 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 AC091305.1-201ENST00000479476 895 ntBASIC26.32■■□□□ 1.8
SMC5Q8IY18 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC5Q8IY18 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SMC5Q8IY18 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.31■■□□□ 1.8
SMC5Q8IY18 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.31■■□□□ 1.8
SMC5Q8IY18 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC5Q8IY18 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SMC5Q8IY18 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.3■■□□□ 1.8
SMC5Q8IY18 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.3■■□□□ 1.8
SMC5Q8IY18 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.3■■□□□ 1.8
SMC5Q8IY18 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC5Q8IY18 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.3■■□□□ 1.8
SMC5Q8IY18 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.3■■□□□ 1.8
SMC5Q8IY18 BX005040.4-201ENST00000637145 1518 ntBASIC26.29■■□□□ 1.8
SMC5Q8IY18 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMC5Q8IY18 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMC5Q8IY18 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMC5Q8IY18 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.29■■□□□ 1.8
SMC5Q8IY18 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMC5Q8IY18 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMC5Q8IY18 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC5Q8IY18 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SMC5Q8IY18 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC5Q8IY18 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMC5Q8IY18 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMC5Q8IY18 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMC5Q8IY18 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.28■■□□□ 1.8
SMC5Q8IY18 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SMC5Q8IY18 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC5Q8IY18 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms