Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DHX40Q8IX18 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.58■■□□□ 1.37
DHX40Q8IX18 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 AL121603.2-201ENST00000557373 2117 ntBASIC23.57■■□□□ 1.36
DHX40Q8IX18 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DHX40Q8IX18 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
DHX40Q8IX18 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DHX40Q8IX18 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DHX40Q8IX18 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DHX40Q8IX18 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.56■■□□□ 1.36
DHX40Q8IX18 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DHX40Q8IX18 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
DHX40Q8IX18 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DHX40Q8IX18 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 AC087239.1-201ENST00000622671 572 ntBASIC23.55■■□□□ 1.36
DHX40Q8IX18 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DHX40Q8IX18 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.55■■□□□ 1.36
DHX40Q8IX18 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.54■■□□□ 1.36
DHX40Q8IX18 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.54■■□□□ 1.36
DHX40Q8IX18 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DHX40Q8IX18 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.53■■□□□ 1.36
DHX40Q8IX18 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
DHX40Q8IX18 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 AP004607.7-201ENST00000527152 1677 ntBASIC23.53■■□□□ 1.36
DHX40Q8IX18 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DHX40Q8IX18 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms