Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD2Q8IV50 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 AF131216.4-201ENST00000638924 1588 ntBASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 AC004448.1-201ENST00000458332 883 ntBASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LYSMD2Q8IV50 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 AC022616.5-201ENST00000518796 181 ntBASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD2Q8IV50 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
LYSMD2Q8IV50 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD2Q8IV50 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 AC019171.1-201ENST00000601251 1056 ntBASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 CA15P2-201ENST00000611168 834 ntBASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms