Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 CA15P2-201ENST00000611168 834 ntBASIC18.77■□□□□ 0.6
LRRC28Q86X40 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC28Q86X40 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC28Q86X40 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC28Q86X40 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC28Q86X40 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC28Q86X40 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC28Q86X40 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC28Q86X40 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.76■□□□□ 0.59
LRRC28Q86X40 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 AC011298.3-201ENST00000615796 283 ntBASIC18.76■□□□□ 0.59
LRRC28Q86X40 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRRC28Q86X40 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC28Q86X40 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 EDA-201ENST00000338901 1233 ntBASIC18.75■□□□□ 0.59
LRRC28Q86X40 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 AC006455.2-201ENST00000429931 906 ntBASIC18.75■□□□□ 0.59
LRRC28Q86X40 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC28Q86X40 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC28Q86X40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 MIR3181-201ENST00000578512 73 ntBASIC18.74■□□□□ 0.59
LRRC28Q86X40 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 AL355001.2-201ENST00000620617 1191 ntBASIC18.74■□□□□ 0.59
LRRC28Q86X40 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRRC28Q86X40 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC28Q86X40 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 AC007952.6-201ENST00000573168 2673 ntBASIC18.73■□□□□ 0.59
LRRC28Q86X40 AC003957.1-201ENST00000625108 2673 ntBASIC18.73■□□□□ 0.59
LRRC28Q86X40 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRRC28Q86X40 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC28Q86X40 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRC28Q86X40 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC28Q86X40 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC28Q86X40 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC28Q86X40 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms