Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC30AQ86WT1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.52■■□□□ 1.19
TTC30AQ86WT1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
TTC30AQ86WT1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
TTC30AQ86WT1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TTC30AQ86WT1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TTC30AQ86WT1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC30AQ86WT1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 AC004854.2-201ENST00000608450 1441 ntBASIC22.5■■□□□ 1.19
TTC30AQ86WT1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 AP004607.4-201ENST00000530158 1459 ntBASIC22.5■■□□□ 1.19
TTC30AQ86WT1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 NTF6G-201ENST00000591094 616 ntBASIC22.5■■□□□ 1.19
TTC30AQ86WT1 AC092437.1-201ENST00000624794 1048 ntBASIC22.5■■□□□ 1.19
TTC30AQ86WT1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC30AQ86WT1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 KRT87P-202ENST00000534226 1464 ntBASIC22.49■■□□□ 1.19
TTC30AQ86WT1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.49■■□□□ 1.19
TTC30AQ86WT1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 LINC00565-201ENST00000562710 2331 ntBASIC22.49■■□□□ 1.19
TTC30AQ86WT1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC30AQ86WT1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC30AQ86WT1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 FBXW4P1-201ENST00000426721 2239 ntBASIC22.47■■□□□ 1.19
TTC30AQ86WT1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC30AQ86WT1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms