Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 AL137060.1-201ENST00000618151 2648 ntBASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 AC131281.2-201ENST00000520478 145 ntBASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 AL121603.2-201ENST00000557373 2117 ntBASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 AC026310.3-201ENST00000625186 2373 ntBASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL55Q7Z7F7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.58□□□□□ -0.23
MRPL55Q7Z7F7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL55Q7Z7F7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 AP005435.1-201ENST00000529293 1178 ntBASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL55Q7Z7F7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MRPL55Q7Z7F7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 Z98882.1-201ENST00000622160 2253 ntBASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL55Q7Z7F7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms