Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF44Q7L0R7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF44Q7L0R7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF44Q7L0R7 AC003102.1-202ENST00000563394 1796 ntBASIC20.34■□□□□ 0.85
RNF44Q7L0R7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 AC026471.6-201ENST00000622954 1905 ntBASIC20.34■□□□□ 0.85
RNF44Q7L0R7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 KRT19P1-201ENST00000405746 1186 ntBASIC20.34■□□□□ 0.85
RNF44Q7L0R7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.34■□□□□ 0.85
RNF44Q7L0R7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF44Q7L0R7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 AC022517.1-201ENST00000592429 346 ntBASIC20.33■□□□□ 0.85
RNF44Q7L0R7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF44Q7L0R7 AC104187.1-201ENST00000607510 612 ntBASIC20.33■□□□□ 0.85
RNF44Q7L0R7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF44Q7L0R7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RNF44Q7L0R7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 AC053503.5-201ENST00000601508 636 ntBASIC20.32■□□□□ 0.84
RNF44Q7L0R7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF44Q7L0R7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF44Q7L0R7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 AC138907.5-202ENST00000569484 235 ntBASIC20.3■□□□□ 0.84
RNF44Q7L0R7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF44Q7L0R7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 AC092666.2-201ENST00000613287 246 ntBASIC20.29■□□□□ 0.84
RNF44Q7L0R7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF44Q7L0R7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 C11orf96-202ENST00000528572 1834 ntBASIC20.28■□□□□ 0.84
RNF44Q7L0R7 AC010542.4-201ENST00000563151 1910 ntBASIC20.28■□□□□ 0.84
RNF44Q7L0R7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 AC010141.2-201ENST00000452426 721 ntBASIC20.28■□□□□ 0.84
RNF44Q7L0R7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF44Q7L0R7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms