Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NIPAL3Q6P499 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.27■□□□□ 0.67
NIPAL3Q6P499 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NIPAL3Q6P499 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NIPAL3Q6P499 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NIPAL3Q6P499 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 OR7E47P-201ENST00000546390 1422 ntBASIC19.24■□□□□ 0.67
NIPAL3Q6P499 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NIPAL3Q6P499 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 AC105265.2-201ENST00000467189 838 ntBASIC19.23■□□□□ 0.67
NIPAL3Q6P499 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NIPAL3Q6P499 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 SLC25A24-204ENST00000569674 2357 ntBASIC19.22■□□□□ 0.67
NIPAL3Q6P499 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 AC104564.3-201ENST00000582367 638 ntBASIC19.22■□□□□ 0.67
NIPAL3Q6P499 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPAL3Q6P499 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms