Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 DUX4L16-201ENST00000555130 1264 ntBASIC19.11■□□□□ 0.65
RTL6Q6ICC9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.1■□□□□ 0.65
RTL6Q6ICC9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTL6Q6ICC9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 EP400NL-214ENST00000641289 2402 ntBASIC19.09■□□□□ 0.65
RTL6Q6ICC9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AL050303.2-201ENST00000619798 666 ntBASIC19.09■□□□□ 0.65
RTL6Q6ICC9 MYCNOS-205ENST00000641950 531 ntBASIC19.09■□□□□ 0.65
RTL6Q6ICC9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTL6Q6ICC9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL6Q6ICC9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
RTL6Q6ICC9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTL6Q6ICC9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL6Q6ICC9 AC137767.1-201ENST00000602918 1920 ntBASIC19.08■□□□□ 0.65
RTL6Q6ICC9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
RTL6Q6ICC9 AC087742.1-201ENST00000575880 1738 ntBASIC19.08■□□□□ 0.64
RTL6Q6ICC9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 GPX1P1-201ENST00000388829 606 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AL355802.2-201ENST00000402069 882 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AC010141.2-201ENST00000452426 721 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AL034346.1-201ENST00000568244 1277 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AC138907.5-202ENST00000569484 235 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AC231657.2-201ENST00000624556 255 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL6Q6ICC9 AC242852.2-201ENST00000615738 1807 ntBASIC19.07■□□□□ 0.64
RTL6Q6ICC9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 LINC00565-201ENST00000562710 2331 ntBASIC19.06■□□□□ 0.64
RTL6Q6ICC9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTL6Q6ICC9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms