Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TPGS2Q68CL5 AC133041.1-202ENST00000642053 222 ntBASIC22.32■■□□□ 1.16
TPGS2Q68CL5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.32■■□□□ 1.16
TPGS2Q68CL5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPGS2Q68CL5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.32■■□□□ 1.16
TPGS2Q68CL5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPGS2Q68CL5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 AC069152.1-201ENST00000438030 544 ntBASIC22.31■■□□□ 1.16
TPGS2Q68CL5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 AC008694.1-202ENST00000636953 945 ntBASIC22.31■■□□□ 1.16
TPGS2Q68CL5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPGS2Q68CL5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 AL512625.2-201ENST00000417533 625 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 CD99P1-205ENST00000527459 561 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 AL162412.1-201ENST00000567129 965 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 AC069236.1-201ENST00000604339 616 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 AC243732.1-201ENST00000612648 864 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 RBM17P2-201ENST00000616397 1405 ntBASIC22.3■■□□□ 1.16
TPGS2Q68CL5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPGS2Q68CL5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TPGS2Q68CL5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 ABHD17AP1-201ENST00000358206 933 ntBASIC22.28■■□□□ 1.16
TPGS2Q68CL5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 KRT18P6-201ENST00000555540 1265 ntBASIC22.28■■□□□ 1.16
TPGS2Q68CL5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TPGS2Q68CL5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 MIR4758-201ENST00000577688 71 ntBASIC22.27■■□□□ 1.16
TPGS2Q68CL5 AC061975.6-201ENST00000579045 1553 ntBASIC22.27■■□□□ 1.16
TPGS2Q68CL5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TPGS2Q68CL5 MKRN4P-201ENST00000444706 1521 ntBASIC22.26■■□□□ 1.15
TPGS2Q68CL5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 AL591742.1-201ENST00000604433 565 ntBASIC22.26■■□□□ 1.15
TPGS2Q68CL5 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.26■■□□□ 1.15
TPGS2Q68CL5 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms