Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TTC39BQ5VTQ0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TTC39BQ5VTQ0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TTC39BQ5VTQ0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TTC39BQ5VTQ0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.08■■□□□ 1.12
TTC39BQ5VTQ0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 AC055733.4-201ENST00000638462 1354 ntBASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC39BQ5VTQ0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 NTF6G-201ENST00000591094 616 ntBASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.06■■□□□ 1.12
TTC39BQ5VTQ0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 AP006587.3-201ENST00000525742 1516 ntBASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39BQ5VTQ0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39BQ5VTQ0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 KRT87P-202ENST00000534226 1464 ntBASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39BQ5VTQ0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms