Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.44□□□□□ -0.1
VPS13DQ5THJ4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.44□□□□□ -0.1
VPS13DQ5THJ4 AC087742.1-201ENST00000575880 1738 ntBASIC14.44□□□□□ -0.1
VPS13DQ5THJ4 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 ESRRAP1-201ENST00000400596 1257 ntBASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 KRT17P1-201ENST00000399211 1546 ntBASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS13DQ5THJ4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 AC008403.3-201ENST00000598924 454 ntBASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS13DQ5THJ4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 AC010980.2-201ENST00000587099 1412 ntBASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 ECEL1P3-201ENST00000427961 737 ntBASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS13DQ5THJ4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 AC069236.1-201ENST00000604339 616 ntBASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 AC233263.1-201ENST00000578059 224 ntBASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS13DQ5THJ4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.11
VPS13DQ5THJ4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
VPS13DQ5THJ4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 AC142381.4-202ENST00000563973 229 ntBASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms