Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 AC123595.1-201ENST00000440769 1046 ntBASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 LINC02228-203ENST00000641970 1355 ntBASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
PTPN20Q4JDL3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN20Q4JDL3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 TERF1P2-201ENST00000583350 1212 ntBASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN20Q4JDL3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN20Q4JDL3 AC019069.1-201ENST00000610008 1333 ntBASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 CCDC92B-201ENST00000575506 885 ntBASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN20Q4JDL3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTPN20Q4JDL3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.16
PTPN20Q4JDL3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.16
PTPN20Q4JDL3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.33■■□□□ 1.16
PTPN20Q4JDL3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 AC079140.4-201ENST00000507448 529 ntBASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN20Q4JDL3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 EEF1DP3-203ENST00000566025 782 ntBASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms