Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 LINC01529-204ENST00000636474 1715 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHRFAM7AQ494W8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 MIR572-201ENST00000384983 95 ntBASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 AC012414.1-201ENST00000556676 535 ntBASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRFAM7AQ494W8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 AC026310.3-201ENST00000625186 2373 ntBASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 IGHV3-19-201ENST00000521488 291 ntBASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 FAM99A-202ENST00000538190 1989 ntBASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRFAM7AQ494W8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 KRT18P14-201ENST00000534205 1250 ntBASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 LINC01960-201ENST00000563759 1884 ntBASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRFAM7AQ494W8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 LINC02228-203ENST00000641970 1355 ntBASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRFAM7AQ494W8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 AC010542.4-201ENST00000563151 1910 ntBASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 FP325331.1-202ENST00000623531 1380 ntBASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHRFAM7AQ494W8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRFAM7AQ494W8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRFAM7AQ494W8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRFAM7AQ494W8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms