Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.83■□□□□ 0.92
CACNA1EQ15878 AC010980.2-201ENST00000587099 1412 ntBASIC20.83■□□□□ 0.92
CACNA1EQ15878 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CACNA1EQ15878 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.83■□□□□ 0.92
CACNA1EQ15878 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.83■□□□□ 0.92
CACNA1EQ15878 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CACNA1EQ15878 AC006058.3-201ENST00000606217 1069 ntBASIC20.83■□□□□ 0.92
CACNA1EQ15878 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.83■□□□□ 0.92
CACNA1EQ15878 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CACNA1EQ15878 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
CACNA1EQ15878 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 AC128676.1-201ENST00000454392 318 ntBASIC20.82■□□□□ 0.92
CACNA1EQ15878 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.82■□□□□ 0.92
CACNA1EQ15878 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 AC120498.10-201ENST00000621827 505 ntBASIC20.82■□□□□ 0.92
CACNA1EQ15878 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.82■□□□□ 0.92
CACNA1EQ15878 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CACNA1EQ15878 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.81■□□□□ 0.92
CACNA1EQ15878 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 AC137767.1-201ENST00000602918 1920 ntBASIC20.81■□□□□ 0.92
CACNA1EQ15878 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CACNA1EQ15878 AC097658.1-201ENST00000475555 843 ntBASIC20.81■□□□□ 0.92
CACNA1EQ15878 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
CACNA1EQ15878 AC243732.1-201ENST00000612648 864 ntBASIC20.81■□□□□ 0.92
CACNA1EQ15878 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA1EQ15878 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CACNA1EQ15878 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CACNA1EQ15878 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.8■□□□□ 0.92
CACNA1EQ15878 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.8■□□□□ 0.92
CACNA1EQ15878 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA1EQ15878 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 AC026366.1-201ENST00000488803 879 ntBASIC20.79■□□□□ 0.92
CACNA1EQ15878 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 RPS2P4-201ENST00000476944 856 ntBASIC20.79■□□□□ 0.92
CACNA1EQ15878 AP003097.1-201ENST00000530657 1135 ntBASIC20.79■□□□□ 0.92
CACNA1EQ15878 AP006294.2-201ENST00000641667 209 ntBASIC20.79■□□□□ 0.92
CACNA1EQ15878 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA1EQ15878 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNA1EQ15878 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA1EQ15878 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
CACNA1EQ15878 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA1EQ15878 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA1EQ15878 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA1EQ15878 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 AC087742.1-201ENST00000575880 1738 ntBASIC20.77■□□□□ 0.92
CACNA1EQ15878 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA1EQ15878 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA1EQ15878 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA1EQ15878 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms