Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CFHR3Q02985 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.59■□□□□ 0.25
CFHR3Q02985 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.59■□□□□ 0.25
CFHR3Q02985 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CFHR3Q02985 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CFHR3Q02985 AC010542.4-201ENST00000563151 1910 ntBASIC16.58■□□□□ 0.25
CFHR3Q02985 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CFHR3Q02985 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.58■□□□□ 0.24
CFHR3Q02985 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CFHR3Q02985 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.58■□□□□ 0.24
CFHR3Q02985 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.58■□□□□ 0.24
CFHR3Q02985 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.58■□□□□ 0.24
CFHR3Q02985 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.58■□□□□ 0.24
CFHR3Q02985 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CFHR3Q02985 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.58■□□□□ 0.24
CFHR3Q02985 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.58■□□□□ 0.24
CFHR3Q02985 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.58■□□□□ 0.24
CFHR3Q02985 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CFHR3Q02985 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFHR3Q02985 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.57■□□□□ 0.24
CFHR3Q02985 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.57■□□□□ 0.24
CFHR3Q02985 AL137784.2-201ENST00000607332 1000 ntBASIC16.57■□□□□ 0.24
CFHR3Q02985 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.57■□□□□ 0.24
CFHR3Q02985 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFHR3Q02985 C11orf96-202ENST00000528572 1834 ntBASIC16.56■□□□□ 0.24
CFHR3Q02985 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CFHR3Q02985 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CFHR3Q02985 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CFHR3Q02985 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 KRT18P11-201ENST00000435214 1283 ntBASIC16.56■□□□□ 0.24
CFHR3Q02985 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.56■□□□□ 0.24
CFHR3Q02985 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.56■□□□□ 0.24
CFHR3Q02985 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFHR3Q02985 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.56■□□□□ 0.24
CFHR3Q02985 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 AC016769.1-201ENST00000409132 1010 ntBASIC16.55■□□□□ 0.24
CFHR3Q02985 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.55■□□□□ 0.24
CFHR3Q02985 KRT18P20-201ENST00000548986 1279 ntBASIC16.55■□□□□ 0.24
CFHR3Q02985 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.55■□□□□ 0.24
CFHR3Q02985 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFHR3Q02985 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.54■□□□□ 0.24
CFHR3Q02985 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.54■□□□□ 0.24
CFHR3Q02985 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.54■□□□□ 0.24
CFHR3Q02985 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CFHR3Q02985 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.54■□□□□ 0.24
CFHR3Q02985 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFHR3Q02985 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms