Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HIST1H3AP68431 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.55■□□□□ 0.56
HIST1H3AP68431 AL354811.1-201ENST00000610286 706 ntBASIC18.55■□□□□ 0.56
HIST1H3AP68431 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIST1H3AP68431 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIST1H3AP68431 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 FEM1AP4-201ENST00000443167 1987 ntBASIC18.54■□□□□ 0.56
HIST1H3AP68431 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 MIR638-201ENST00000385237 100 ntBASIC18.54■□□□□ 0.56
HIST1H3AP68431 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H3AP68431 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H3AP68431 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST1H3AP68431 TPRG1LP1-201ENST00000598702 760 ntBASIC18.53■□□□□ 0.56
HIST1H3AP68431 AL358852.1-201ENST00000623174 1268 ntBASIC18.53■□□□□ 0.56
HIST1H3AP68431 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H3AP68431 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H3AP68431 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H3AP68431 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H3AP68431 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H3AP68431 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H3AP68431 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H3AP68431 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 AL137060.1-201ENST00000618151 2648 ntBASIC18.51■□□□□ 0.55
HIST1H3AP68431 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H3AP68431 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST1H3AP68431 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms