Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 AL499627.2-201ENST00000606283 725 ntBASIC17.15■□□□□ 0.34
RAB11AP62491 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RAB11AP62491 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11AP62491 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11AP62491 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB11AP62491 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB11AP62491 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB11AP62491 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB11AP62491 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB11AP62491 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB11AP62491 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB11AP62491 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB11AP62491 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11AP62491 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RAB11AP62491 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB11AP62491 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB11AP62491 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB11AP62491 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 AC079089.2-201ENST00000531211 1277 ntBASIC17.13■□□□□ 0.33
RAB11AP62491 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB11AP62491 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB11AP62491 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RAB11AP62491 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB11AP62491 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB11AP62491 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB11AP62491 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB11AP62491 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB11AP62491 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB11AP62491 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB11AP62491 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11AP62491 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 FEM1AP4-201ENST00000443167 1987 ntBASIC17.11■□□□□ 0.33
RAB11AP62491 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB11AP62491 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB11AP62491 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB11AP62491 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB11AP62491 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB11AP62491 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 OR7E47P-201ENST00000546390 1422 ntBASIC17.11■□□□□ 0.33
RAB11AP62491 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB11AP62491 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
RAB11AP62491 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11AP62491 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11AP62491 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11AP62491 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11AP62491 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11AP62491 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11AP62491 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB11AP62491 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms