Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM6P62312 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.64■□□□□ 0.57
LSM6P62312 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.64■□□□□ 0.57
LSM6P62312 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM6P62312 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LSM6P62312 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LSM6P62312 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.63■□□□□ 0.57
LSM6P62312 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 AL358852.1-201ENST00000623174 1268 ntBASIC18.63■□□□□ 0.57
LSM6P62312 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM6P62312 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LSM6P62312 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LSM6P62312 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM6P62312 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LSM6P62312 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.62■□□□□ 0.57
LSM6P62312 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.62■□□□□ 0.57
LSM6P62312 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LSM6P62312 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM6P62312 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
LSM6P62312 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM6P62312 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM6P62312 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM6P62312 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSM6P62312 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.61■□□□□ 0.57
LSM6P62312 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM6P62312 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM6P62312 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LSM6P62312 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM6P62312 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM6P62312 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM6P62312 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM6P62312 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 FEM1AP4-201ENST00000443167 1987 ntBASIC18.6■□□□□ 0.57
LSM6P62312 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM6P62312 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM6P62312 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LSM6P62312 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM6P62312 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 MIR638-201ENST00000385237 100 ntBASIC18.59■□□□□ 0.57
LSM6P62312 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.59■□□□□ 0.57
LSM6P62312 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
LSM6P62312 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM6P62312 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.59■□□□□ 0.57
LSM6P62312 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM6P62312 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.59■□□□□ 0.57
LSM6P62312 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM6P62312 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM6P62312 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms