Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKN2DP55273 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKN2DP55273 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKN2DP55273 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
CDKN2DP55273 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKN2DP55273 MIR572-201ENST00000384983 95 ntBASIC20.98■□□□□ 0.95
CDKN2DP55273 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKN2DP55273 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.98■□□□□ 0.95
CDKN2DP55273 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKN2DP55273 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
CDKN2DP55273 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
CDKN2DP55273 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKN2DP55273 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN2DP55273 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDKN2DP55273 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDKN2DP55273 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDKN2DP55273 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN2DP55273 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.97■□□□□ 0.95
CDKN2DP55273 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN2DP55273 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN2DP55273 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKN2DP55273 AC055733.4-201ENST00000638462 1354 ntBASIC20.97■□□□□ 0.95
CDKN2DP55273 AC009237.3-201ENST00000393279 1427 ntBASIC20.96■□□□□ 0.95
CDKN2DP55273 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKN2DP55273 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDKN2DP55273 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKN2DP55273 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKN2DP55273 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2DP55273 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKN2DP55273 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2DP55273 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDKN2DP55273 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2DP55273 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKN2DP55273 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2DP55273 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2DP55273 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2DP55273 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2DP55273 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2DP55273 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2DP55273 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2DP55273 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKN2DP55273 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKN2DP55273 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKN2DP55273 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2DP55273 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2DP55273 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2DP55273 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKN2DP55273 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2DP55273 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKN2DP55273 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKN2DP55273 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CDKN2DP55273 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 AC005224.4-201ENST00000583262 1652 ntBASIC20.94■□□□□ 0.94
CDKN2DP55273 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDKN2DP55273 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKN2DP55273 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKN2DP55273 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.94■□□□□ 0.94
CDKN2DP55273 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2DP55273 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKN2DP55273 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKN2DP55273 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2DP55273 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDKN2DP55273 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDKN2DP55273 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKN2DP55273 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKN2DP55273 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.92■□□□□ 0.94
CDKN2DP55273 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKN2DP55273 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKN2DP55273 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms