Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP1B3P54709 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP1B3P54709 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP1B3P54709 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP1B3P54709 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP1B3P54709 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP1B3P54709 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP1B3P54709 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP1B3P54709 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP1B3P54709 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP1B3P54709 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP1B3P54709 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
ATP1B3P54709 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP1B3P54709 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATP1B3P54709 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP1B3P54709 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ATP1B3P54709 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 SLC47A1P1-202ENST00000449666 945 ntBASIC18.32■□□□□ 0.52
ATP1B3P54709 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP1B3P54709 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP1B3P54709 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP1B3P54709 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP1B3P54709 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP1B3P54709 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 AL136116.3-201ENST00000402907 1138 ntBASIC18.31■□□□□ 0.52
ATP1B3P54709 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP1B3P54709 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP1B3P54709 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ATP1B3P54709 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP1B3P54709 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP1B3P54709 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP1B3P54709 Z98882.1-201ENST00000622160 2253 ntBASIC18.3■□□□□ 0.52
ATP1B3P54709 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP1B3P54709 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP1B3P54709 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP1B3P54709 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP1B3P54709 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP1B3P54709 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP1B3P54709 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP1B3P54709 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP1B3P54709 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP1B3P54709 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
ATP1B3P54709 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP1B3P54709 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP1B3P54709 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP1B3P54709 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP1B3P54709 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ATP1B3P54709 AP004607.7-201ENST00000527152 1677 ntBASIC18.29■□□□□ 0.52
ATP1B3P54709 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ATP1B3P54709 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP1B3P54709 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP1B3P54709 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms