Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PMS2P54278 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PMS2P54278 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS2P54278 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PMS2P54278 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PMS2P54278 AC133561.4-201ENST00000566112 224 ntBASIC21.84■■□□□ 1.09
PMS2P54278 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.84■■□□□ 1.09
PMS2P54278 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.84■■□□□ 1.09
PMS2P54278 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS2P54278 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS2P54278 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
PMS2P54278 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PMS2P54278 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.83■■□□□ 1.09
PMS2P54278 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PMS2P54278 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.83■■□□□ 1.09
PMS2P54278 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.83■■□□□ 1.09
PMS2P54278 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.83■■□□□ 1.09
PMS2P54278 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PMS2P54278 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PMS2P54278 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.83■■□□□ 1.08
PMS2P54278 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PMS2P54278 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
PMS2P54278 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS2P54278 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PMS2P54278 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PMS2P54278 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS2P54278 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PMS2P54278 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PMS2P54278 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PMS2P54278 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.82■■□□□ 1.08
PMS2P54278 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.81■■□□□ 1.08
PMS2P54278 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PMS2P54278 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.81■■□□□ 1.08
PMS2P54278 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PMS2P54278 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.81■■□□□ 1.08
PMS2P54278 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.81■■□□□ 1.08
PMS2P54278 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
PMS2P54278 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PMS2P54278 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PMS2P54278 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PMS2P54278 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.8■■□□□ 1.08
PMS2P54278 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PMS2P54278 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.8■■□□□ 1.08
PMS2P54278 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.8■■□□□ 1.08
PMS2P54278 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PMS2P54278 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 AL049796.1-201ENST00000565336 1766 ntBASIC21.79■■□□□ 1.08
PMS2P54278 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PMS2P54278 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
PMS2P54278 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PMS2P54278 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
PMS2P54278 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PMS2P54278 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PMS2P54278 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PMS2P54278 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.78■■□□□ 1.08
PMS2P54278 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.78■■□□□ 1.08
PMS2P54278 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PMS2P54278 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.78■■□□□ 1.08
PMS2P54278 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PMS2P54278 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.78■■□□□ 1.08
PMS2P54278 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PMS2P54278 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.78■■□□□ 1.08
PMS2P54278 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PMS2P54278 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms